Plot spectral curves — explorespec • pavo

Plots one or multiple spectral curves in the same graph to rapidly compare groups of spectra.

Usage

explorespec(
  rspecdata,
  by = 1,
  scale = c("equal", "free"),
  legpos = "topright",
  ...
)

rspecdata: (required) a data frame, possibly of class rspec, which contains a column containing a wavelength range, named 'wl', and spectra data in remaining columns.
by: number of spectra to include in each graph (defaults to 1)
scale: defines how the y-axis should be scaled. "free": panels can vary in the range of the y-axis; "equal": all panels have the y-axis with the same range.
legpos: legend position control. Either a vector containing x and y coordinates or a single keyword from the list: "bottomright", "bottom", "bottomleft", "left", "topleft", "top", "topright", "right" and "center".
...: additional parameters to be passed to plot

Spectral curve plots

Number of plots presented per page depends on the number of graphs produced.

data(sicalis)
explorespec(sicalis, 3)

explorespec(sicalis, 3, ylim = c(0, 100), legpos = c(500, 80))